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  5. Len_g48408

Len_g48408


Description : not classified & original description: none


Gene families : OG0002863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48408

Target Alias Description ECC score Gene Family Method Actions
Adi_g004089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18869 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06090 No alias SIM-type cyclin-dependent kinase inhibitor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 84 131
No external refs found!