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  5. Len_g47501

Len_g47501


Description : not classified & original description: none


Gene families : OG0000250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47501

Target Alias Description ECC score Gene Family Method Actions
Adi_g025063 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082433 No alias ABC1 atypical protein kinase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14486 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45250.t1 Aspi01Gene45250 ABC1 atypical protein kinase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68517.t1 ATATH8, Aspi01Gene68517 ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08867 ATATH8 ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020660.19 No alias Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder output from all 47 species
LOC_Os07g27480.1 LOC_Os07g27480 protein kinase (ABC1) 0.02 OrthoFinder output from all 47 species
Ore_g44172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10925 No alias ABC1 atypical protein kinase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006687 ATATH8 ABC1 atypical protein kinase & original description: CDS=53-2932 0.02 OrthoFinder output from all 47 species
Sam_g14229 No alias ABC1 atypical protein kinase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004147 ABC1_dom 92 210
No external refs found!