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  5. Len_g47500

Len_g47500 (ATLDA, ATPU1, LDA, PU1)


Aliases : ATLDA, ATPU1, LDA, PU1

Description : starch-debranching pullulan-6-glucanohydrolase *(PU1) & original description: none


Gene families : OG0004422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47500
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Aob_g18600 ATLDA, ATPU1, LDA, PU1 starch-debranching pullulan-6-glucanohydrolase *(PU1) &... 0.03 OrthoFinder output from all 47 species
Mp1g06190.1 ATLDA, ATPU1, LDA, PU1 starch-debranching pullulanase-type enzyme 0.06 OrthoFinder output from all 47 species
Smo165275 ATLDA, ATPU1, LDA, PU1 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR024561 Pullul_strch_C 880 1049
IPR005323 CBM41_pullulanase 71 159
IPR040671 Pullulanase_N2 176 287
IPR004193 Glyco_hydro_13_N 295 379
No external refs found!