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  5. Len_g46226

Len_g46226


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g46226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g082491 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30349 No alias 2S globulin seed storage protein & original description: none 0.14 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.13 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.14 OrthoFinder output from all 47 species
Als_g37029 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50715 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21301 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64637 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68849.t1 Aspi01Gene68849 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68852.t1 Aspi01Gene68852 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59888 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G065600.1 Ceric.14G065600 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G084700.1 Ceric.14G084700 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z042900.1 Ceric.1Z042900 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z210700.1 Ceric.1Z210700 2S globulin seed storage protein & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.15 OrthoFinder output from all 47 species
Dcu_g29297 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g29930 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g41624 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47659 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.03 OrthoFinder output from all 47 species
Gb_07285 No alias no description available(sp|q7m443|chit2_tulsb : 215.0) 0.04 OrthoFinder output from all 47 species
Gb_07286 No alias no description available(sp|q9slp4|chit1_tulsb : 171.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g57400.1 LOC_Os01g57400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g28080.1 LOC_Os10g28080 no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.02 OrthoFinder output from all 47 species
Len_g41293 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48364 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g50580 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g41812 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30590 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22062 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g39729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.05 OrthoFinder output from all 47 species
Spa_g05409 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16342 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40975 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35737 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g37745 No alias 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g41842 No alias 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.03 OrthoFinder output from all 47 species
Zm00001e004771_P001 Zm00001e004771 no description available(sp|q7m443|chit2_tulsb : 319.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.02 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.03 OrthoFinder output from all 47 species
Zm00001e028945_P001 Zm00001e028945 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 166 293
No external refs found!