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  5. Len_g45652

Len_g45652


Description : not classified & original description: none


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g45652

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.02 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo413794 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 2 172
IPR029413 RG-lyase_II 326 396
IPR029411 RG-lyase_III 413 600
No external refs found!