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  5. Len_g44864

Len_g44864


Description : ARID-type transcription factor & original description: none


Gene families : OG0002366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44864

Target Alias Description ECC score Gene Family Method Actions
AT2G17410 No alias ARID/BRIGHT DNA-binding domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g111878 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024594 No alias ARID-type transcription factor & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
MA_103907g0010 No alias transcription factor (ARID) 0.03 OrthoFinder output from all 47 species
Mp8g07310.1 No alias transcription factor (ARID) 0.03 OrthoFinder output from all 47 species
Nbi_g02129 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02235 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11306 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19197 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52440 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00887 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030505_P003 Zm00001e030505 transcription factor (ARID) 0.02 OrthoFinder output from all 47 species
Zm00001e037576_P002 Zm00001e037576 transcription factor (ARID) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001606 ARID_dom 165 249
IPR002068 A-crystallin/Hsp20_dom 429 509
No external refs found!