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  5. Len_g42556

Len_g42556


Description : beta-1,4-galactosyltransferase *(GALS) & original description: none


Gene families : OG0000987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g42556

Target Alias Description ECC score Gene Family Method Actions
AT3G60990 No alias Domain of unknown function (DUF23) 0.02 OrthoFinder output from all 47 species
AT5G48190 No alias Domain of unknown function (DUF23) 0.02 OrthoFinder output from all 47 species
Adi_g104474 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16965 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10838 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G084100.1 Ceric.13G084100 beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
Dac_g35676 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g15520 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01013454001 No alias Cell wall.pectin.rhamnogalacturonan... 0.04 OrthoFinder output from all 47 species
LOC_Os06g41910.1 LOC_Os06g41910 beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Len_g31799 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_898638g0010 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Mp1g18380.1 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Mp2g14970.1 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Mp4g09490.1 No alias beta-1,4-galactosyltransferase 0.05 OrthoFinder output from all 47 species
Mp6g19180.1 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Mp6g19260.1 No alias beta-1,4-galactosyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 259 385
No external refs found!