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  5. Len_g42407

Len_g42407 (COPT5)


Aliases : COPT5

Description : copper transporter *(COPT) & original description: none


Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g42407

Target Alias Description ECC score Gene Family Method Actions
AT2G37925 COPT4 copper transporter 4 0.02 OrthoFinder output from all 47 species
Adi_g046008 COPT5 copper transporter *(COPT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46860 COPT5 copper transporter *(COPT) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49938.t1 COPT2, Aspi01Gene49938 copper transporter *(COPT) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G003900.1 COPT5, Ceric.12G003900 copper transporter *(COPT) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g38677 COPT5 copper transporter *(COPT) & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g24804 COPT2 copper transporter *(COPT) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26532 COPT1 copper transporter *(COPT) & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g34027 COPT1 copper transporter *(COPT) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g35050.1 COPT1, LOC_Os05g35050 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species
LOC_Os08g35490.1 COPT5, LOC_Os08g35490 copper cation channel (COPT). copper transporter (COPT) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26900.1 COPT5, LOC_Os09g26900 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species
Mp8g07760.1 COPT5 copper cation channel (COPT). copper transporter (COPT) 0.02 OrthoFinder output from all 47 species
Msp_g38834 No alias copper transporter *(COPT) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018841 COPT5 copper transporter *(COPT) & original description: CDS=1-582 0.02 OrthoFinder output from all 47 species
Smo105714 COPT5 Nutrient uptake.copper uptake.reduction-based... 0.02 OrthoFinder output from all 47 species
Smo413717 COPT5 Nutrient uptake.copper uptake.reduction-based... 0.02 OrthoFinder output from all 47 species
Smo413719 COPT5 Nutrient uptake.copper uptake.reduction-based... 0.02 OrthoFinder output from all 47 species
Smo99066 No alias Nutrient uptake.copper uptake.reduction-based... 0.02 OrthoFinder output from all 47 species
Solyc02g082080.1.1 COPT5, Solyc02g082080 copper cation channel (COPT). copper transporter (COPT) 0.02 OrthoFinder output from all 47 species
Solyc09g014870.1.1 Solyc09g014870 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species
Zm00001e008180_P001 COPT1, Zm00001e008180 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0035434 copper ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007274 Cop_transporter 24 145
No external refs found!