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  5. Len_g40352

Len_g40352 (AtGH9B8, GH9B8)


Aliases : AtGH9B8, GH9B8

Description : not classified & original description: none


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40352

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255530 ATCEL2, CEL2,... Endoglucanase 1 OS=Persea americana 0.06 OrthoFinder output from all 47 species
Aop_g70443 AtGH9A4, GH9A4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07667 AtGH9B7, GH9B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34874 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_10437098g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pp3c11_17980V3.1 ATCEL2, CEL2,... cellulase 2 0.01 OrthoFinder output from all 47 species
Sam_g25927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 4 75
No external refs found!