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  5. Len_g38826

Len_g38826


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38826

Target Alias Description ECC score Gene Family Method Actions
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Cba_g05646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G004900.1 ATX1, ATATX1,... copper chaperone *(ATX/CCH) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20000.1 LOC_Os09g20000 Heavy metal-associated isoprenylated plant protein 20... 0.04 OrthoFinder output from all 47 species
Lfl_g20193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_1600V3.1 Pp3c14_1600 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Zm00001e029729_P001 Zm00001e029729 Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 75 130
No external refs found!