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  5. Len_g37428

Len_g37428


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g37428
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G04560 No alias AWPM-19-like family protein 0.03 OrthoFinder output from all 47 species
AT1G29520 No alias AWPM-19-like family protein 0.02 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.02 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.02 OrthoFinder output from all 47 species
Adi_g011454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.03 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_110841g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_482741g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Pnu_g18880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Smo444324 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc05g053160.3.1 Solyc05g053160 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 141
No external refs found!