Len_g35299

Description : translation termination factor *(eRF3) & original description: none

Gene families : OG0004213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004213_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g35299

Target	Alias	Description	ECC score	Gene Family Method
Aev_g20715	No alias	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
Ala_g10914	No alias	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
Aop_g21103	No alias	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001151	No alias	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
Ceric.02G096500.1	Ceric.02G096500	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g06375	No alias	translation termination factor *(eRF3) & original...	0.04	OrthoFinder output from all 47 species
Dde_g00750	No alias	translation termination factor *(eRF3) & original...	0.03	OrthoFinder output from all 47 species
MA_10429223g0010	No alias	Elongation factor 1-alpha OS=Vicia faba...	0.02	OrthoFinder output from all 47 species
Msp_g06356	No alias	translation termination factor *(eRF3) & original...	0.04	OrthoFinder output from all 47 species
Pir_g16691	No alias	translation termination factor *(eRF3) & original...	0.04	OrthoFinder output from all 47 species
Smo115313	No alias	Protein biosynthesis.translation termination.eRF3...	0.03	OrthoFinder output from all 47 species
Spa_g00747	No alias	translation termination factor *(eRF3) & original...	0.04	OrthoFinder output from all 47 species
Tin_g11299	No alias	translation termination factor *(eRF3) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e040640_P002	Zm00001e040640	eRF3 peptide release factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	134	337
IPR004160	Transl_elong_EFTu/EF1A_C	449	560
IPR004161	EFTu-like_2	377	444

External Links

No external refs found!

Len_g35299

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation