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  5. Len_g33264

Len_g33264


Description : chromatin architectural modulator *(DEK) & original description: none


Gene families : OG0001438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33264

Target Alias Description ECC score Gene Family Method Actions
Adi_g110159 No alias chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015996 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
MA_108165g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g01089 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g10960 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16952 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!