Len_g30748 (ATMED14, MED14, SWP)

Aliases : ATMED14, MED14, SWP

Description : component *(MED14) of tail module of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0003954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003954_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g30748

Target	Alias	Description	ECC score	Gene Family Method
AT3G04740	ATMED14, MED14, SWP	RNA polymerase II transcription mediators	0.04	OrthoFinder output from all 47 species
Ala_g07115	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Als_g01988	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Ceric.06G040100.1	ATMED14, MED14,...	component *(MED14) of tail module of MEDIATOR...	0.05	OrthoFinder output from all 47 species
Cre03.g190550	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01021781001	ATMED14, MED14, SWP	RNA biosynthesis.RNA polymerase II-dependent...	0.04	OrthoFinder output from all 47 species
Gb_36567	ATMED14, MED14, SWP	component MED14 of tail module of MEDIATOR transcription...	0.04	OrthoFinder output from all 47 species
MA_10435964g0030	ATMED14, MED14, SWP	component MED14 of tail module of MEDIATOR transcription...	0.04	OrthoFinder output from all 47 species
Msp_g13510	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.05	OrthoFinder output from all 47 species
Nbi_g16571	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Pnu_g13861	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Sam_g17509	No alias	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Smo90823	ATMED14, MED14, SWP	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
Solyc01g097320.3.1	ATMED14, MED14,...	component MED14 of tail module of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Spa_g04873	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Tin_g09950	ATMED14, MED14, SWP	component *(MED14) of tail module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Zm00001e009618_P001	ATMED14, MED14,...	component MED14 of tail module of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013947	Mediator_Med14	59	246

External Links

No external refs found!

Len_g30748 (ATMED14, MED14, SWP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation