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  5. Len_g30530

Len_g30530


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30530

Target Alias Description ECC score Gene Family Method Actions
AT5G02180 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g084295 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47786 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046809 No alias solute transporter *(AAAP) & original description: CDS=42-1736 0.03 OrthoFinder output from all 47 species
Azfi_s0870.g090592 No alias solute transporter *(AAAP) & original description: CDS=69-1490 0.03 OrthoFinder output from all 47 species
Dac_g19618 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g14120.1 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Msp_g26461 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05277 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31949 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo438611 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Tin_g28133 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 95 482
No external refs found!