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  5. Len_g29998

Len_g29998


Description : metabolite transporter *(DTX) & original description: none


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29998

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01145.t1 Aspi01Gene01145 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Cre10.g445850 No alias Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
Dac_g35074 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15895 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10399 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Len_g48729 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
MA_170499g0010 No alias metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
Solyc10g007100.3.1 ALF5, Solyc10g007100 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e004873_P001 Zm00001e004873 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 261 422
IPR002528 MATE_fam 40 200
No external refs found!