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  5. Len_g29520

Len_g29520


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29520

Target Alias Description ECC score Gene Family Method Actions
Adi_g088992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G062800.1 Ceric.25G062800 not classified & original description: pacid=50593278... 0.03 OrthoFinder output from all 47 species
Dac_g19374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os06g02240.1 LOC_Os06g02240 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_425143g0010 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g01032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018884 No alias not classified & original description: CDS=125-916 0.03 OrthoFinder output from all 47 species
Solyc02g067390.3.1 Solyc02g067390 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 70 130
No external refs found!