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  5. Len_g28948

Len_g28948


Description : not classified & original description: none


Gene families : OG0000298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28948
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Adi_g046116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22883.t1 Aspi01Gene22883 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35232.t1 Aspi01Gene35232 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44965.t1 Aspi01Gene44965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z189400.1 Ceric.1Z189400 not classified & original description: pacid=50637395... 0.03 OrthoFinder output from all 47 species
Dde_g26747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08317 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24565 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g57226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g05176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g23901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g32598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g32815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35384 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR041373 RT_RNaseH 4 108
No external refs found!