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  5. Len_g28864

Len_g28864 (LTA3)


Aliases : LTA3

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0001304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28864

Target Alias Description ECC score Gene Family Method Actions
Cba_g67288 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_39057g0020 No alias component E2 of mitochondrial pyruvate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
Nbi_g13271 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014103 No alias EC_2.3 acyltransferase & original description: CDS=505-2079 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016338 LTA3 EC_2.3 acyltransferase & original description: CDS=167-1756 0.04 OrthoFinder output from all 47 species
Solyc07g006790.3.1 Solyc07g006790 component E2 of mitochondrial pyruvate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
Solyc11g007720.2.1 LTA3, Solyc11g007720 component E2 of mitochondrial pyruvate dehydrogenase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001078 2-oxoacid_DH_actylTfrase 288 518
IPR000089 Biotin_lipoyl 87 160
IPR004167 PSBD 213 246
No external refs found!