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  5. Len_g28163

Len_g28163


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: none


Gene families : OG0002110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28163

Target Alias Description ECC score Gene Family Method Actions
Adi_g056260 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Als_g15896 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ceric.09G007600.1 Ceric.09G007600 component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ehy_g05991 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ehy_g19425 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01028133001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_29452g0010 No alias component IES2 of INO80 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Nbi_g11459 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ore_g29231 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.04 OrthoFinder output from all 47 species
Pir_g11799 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ppi_g09777 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Sam_g50852 No alias component *(IES2) of INO80 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Solyc01g100540.4.1 Solyc01g100540 component IES2 of INO80 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Solyc06g009600.2.1 Solyc06g009600 component IES2 of INO80 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006880 INO80B_C 559 643
IPR007529 Znf_HIT 660 690
No external refs found!