Aliases : AtTLP3, TLP3
Description : TUB-type transcription factor & original description: none
Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g01504 | AtTLP3, TLP3 | TUB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g28748 | AtTLP3, TLP3 | TUB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017810001 | AtTLP3, TLP3 | RNA biosynthesis.transcriptional activation.TUB... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g48370.1 | AtTLP7, TLP7,... | transcription factor (TUB) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g48670.1 | AtTLP7, TLP7,... | transcription factor (TUB) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g42650 | AtTLP1, TLP1 | TUB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g00511 | AtTLP3, TLP3 | TUB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |