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  5. Len_g26860

Len_g26860 (SSL3)


Aliases : SSL3

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0001226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g26860
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT3G51450 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g03050 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12182 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021651001 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02716 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_04241 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g22580 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_908014g0010 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010759_P002 LAP3, Zm00001e010759 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e011162_P001 Zm00001e011162 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 4 58
No external refs found!