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  5. Len_g26318

Len_g26318


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g26318

Target Alias Description ECC score Gene Family Method Actions
Adi_g003333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022087 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46730 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26153 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05226 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18790 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08600.t1 Aspi01Gene08600 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20543.t1 EMB2758, Aspi01Gene20543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50511.t1 Aspi01Gene50511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68197.t1 Aspi01Gene68197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008963 No alias not classified & original description: CDS=1-2157 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Azfi_s0601.g078901 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Cba_g04042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11914 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.03 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72930.1 LOC_Os01g72930 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.02 OrthoFinder output from all 47 species
Len_g04340 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41131 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13570 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.04 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26414 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 693 740
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 81 127
IPR002885 Pentatricopeptide_repeat 387 433
IPR002885 Pentatricopeptide_repeat 490 536
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 591 639
IPR002885 Pentatricopeptide_repeat 798 827
IPR002885 Pentatricopeptide_repeat 834 861
No external refs found!