Len_g23860 (ATHB5, ATHB-5, HB5)

Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g23860
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Aob_g06571	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g05006	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene20017.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ceric.03G096000.1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01032491001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_39722	ATHB13	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Ppi_g54343	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	182	229
IPR003106	Leu_zip_homeo	231	270

External Links

No external refs found!