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  5. Len_g23674

Len_g23674 (CLB6, ISPH, HDR)


Aliases : CLB6, ISPH, HDR

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase & original description: none


Gene families : OG0002959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23674
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00159100 CLB6, ISPH, HDR,... Secondary metabolism.terpenoids.methylerythritol... 0.04 OrthoFinder output from all 47 species
Als_g32656 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.06 OrthoFinder output from all 47 species
Als_g61205 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Aop_g00615 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene56141.t1 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Cba_g19279 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.05 OrthoFinder output from all 47 species
Cre08.g372950 CLB6, ISPH, HDR Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
Dac_g22248 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Dac_g40263 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
LOC_Os03g52170.1 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.06 OrthoFinder output from all 47 species
Lfl_g03250 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.05 OrthoFinder output from all 47 species
MA_10431651g0010 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.03 OrthoFinder output from all 47 species
MA_13946g0010 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 OrthoFinder output from all 47 species
Msp_g19463 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Nbi_g01109 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Pir_g04579 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Ppi_g05190 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Spa_g09223 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Tin_g05605 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Zm00001e005577_P002 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEA Interproscan
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR003451 LytB/IspH 164 505
No external refs found!