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  5. Len_g23600

Len_g23600


Description : component *(GatA) of glutamyl-tRNA-dependent amidotransferase complex & original description: none


Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23600
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g055235 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Azfi_s0485.g073411 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Cba_g08123 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.09G091800.1 Ceric.09G091800 component *(GatA) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Dde_g08150 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01020788001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
LOC_Os04g55050.1 LOC_Os04g55050 component GatA of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Mp1g01690.1 No alias component GatA of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Msp_g43744 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ore_g28904 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Pir_g18796 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Pp3c16_16670V3.1 Pp3c16_16670 Amidase family protein 0.03 OrthoFinder output from all 47 species
Ppi_g10248 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Sam_g39506 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Sam_g51291 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Smo440512 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Solyc10g007840.3.1 Solyc10g007840 component GatA of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 83 532
No external refs found!