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  5. Len_g23266

Len_g23266 (APRR1, AtTOC1, TOC1, PRR1)


Aliases : APRR1, AtTOC1, TOC1, PRR1

Description : circadian clock evening oscillator component *(TOC1) of circadian clock & original description: none


Gene families : OG0002425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23266

Target Alias Description ECC score Gene Family Method Actions
AT5G61380 APRR1, AtTOC1, TOC1, PRR1 CCT motif -containing response regulator protein 0.04 OrthoFinder output from all 47 species
Adi_g116998 APRR9, TL1, PRR9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115770.3.1 APRR1, AtTOC1,... circadian clock evening oscillator component TOC1 of... 0.03 OrthoFinder output from all 47 species
Spa_g12492 APRR1, AtTOC1, TOC1, PRR1 circadian clock evening oscillator component *(TOC1) of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 36 137
IPR010402 CCT_domain 461 503
No external refs found!