Len_g22996


Description : component *(FES1) of FRI-C transcription effector complex & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22996

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00087040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Adi_g073671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ala_g14556 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aop_g08771 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.29G050700.1 Ceric.29G050700 component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Dac_g06929 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Dac_g28218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
GSVIVT01008114001 No alias Zinc finger CCCH domain-containing protein 38... 0.02 OrthoFinder output from all 47 species
GSVIVT01010035001 ACCD RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04170.1 LOC_Os08g04170 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g29094 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
MA_111475g0010 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_111475g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g04479 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439131 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc06g069440.3.1 Solyc06g069440 Zinc finger CCCH domain-containing protein 38... 0.02 OrthoFinder output from all 47 species
Zm00001e000843_P002 Zm00001e000843 Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e040314_P001 Zm00001e040314 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!