Len_g22993


Description : not classified & original description: none


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22993

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254550 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.1 OrthoFinder output from all 47 species
Adi_g011988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59720.t1 Aspi01Gene59720 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G031700.1 Ceric.15G031700 not classified & original description: pacid=50639891... 0.05 OrthoFinder output from all 47 species
Dcu_g08332 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g10094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_07542 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.08 OrthoFinder output from all 47 species
LOC_Os02g05490.1 LOC_Os02g05490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g38480.1 LOC_Os02g38480 TNO1 vesicle trafficking tethering factor 0.07 OrthoFinder output from all 47 species
Lfl_g07858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430492g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431592g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_156987g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_4333439g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g25758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022514 No alias not classified & original description: CDS=346-8904 0.05 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e013662_P003 Zm00001e013662 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e015026_P001 Zm00001e015026 TNO1 vesicle trafficking tethering factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!