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  5. Len_g22989

Len_g22989 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22989

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.02 OrthoFinder output from all 47 species
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.03 OrthoFinder output from all 47 species
Ala_g16443 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18808 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26223 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23326 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01667.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28059.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28061.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G066000.1 ABCG40, PDR12,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cre09.g395750 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g24516 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25261 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017189001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
GSVIVT01017198001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01035785001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os06g36090.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g16290.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g16330.2 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425791g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_10427561g0020 ABCG40, PDR12,... ABC transporter G family member 31 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10427683g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_124091g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp8g13070.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g04228 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26198 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39006 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo441717 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo82705 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc05g018510.3.1 PDR4, ATPDR4,... cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g100180.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Tin_g20998 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 203 385
IPR029481 ABC_trans_N 129 178
IPR013525 ABC_2_trans 1233 1445
IPR013525 ABC_2_trans 539 751
IPR003439 ABC_transporter-like_ATP-bd 935 1087
IPR013581 PDR_assoc 760 816
IPR043926 ABCG_dom 1116 1177
IPR043926 ABCG_dom 418 520
No external refs found!