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  5. Len_g22717

Len_g22717 (PTAC12, HMR)


Aliases : PTAC12, HMR

Description : transcriptional coactivator *(HEMERA) & original description: none


Gene families : OG0007916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22717

Target Alias Description ECC score Gene Family Method Actions
Adi_g057282 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Aob_g13152 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G090100.1 PTAC12, HMR,... transcriptional coactivator *(HEMERA) & original... 0.04 OrthoFinder output from all 47 species
Ore_g03883 PTAC12, HMR transcriptional coactivator *(HEMERA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g27580 No alias transcriptional coactivator *(HEMERA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g46837 No alias transcriptional coactivator *(HEMERA) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e019697_P001 PTAC12, HMR,... PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!