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  5. Len_g22530

Len_g22530 (CSY2)


Aliases : CSY2

Description : citrate synthase & original description: none


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22530
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Als_g38424 CSY2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14584 CSY2 citrate synthase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G069400.1 CSY3, Ceric.01G069400 citrate synthase & original description: pacid=50592334... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.4 CSY2 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Cre03.g149100 CSY3 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
Dcu_g19035 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g13840.1 CSY3, LOC_Os02g13840 citrate synthase 0.03 OrthoFinder output from all 47 species
Mp6g21480.1 CSY3 citrate synthase 0.03 OrthoFinder output from all 47 species
Nbi_g13282 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g055840.3.1 CSY3, Solyc07g055840 citrate synthase 0.02 OrthoFinder output from all 47 species
Zm00001e014403_P005 CSY3, Zm00001e014403 citrate synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 1 297
No external refs found!