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  5. Len_g22517

Len_g22517 (PSBQA, PSBQ-1, PSBQ)


Aliases : PSBQA, PSBQ-1, PSBQ

Description : component *(PsbQ) of PS-II oxygen-evolving center & original description: none


Gene families : OG0002352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22517
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265990 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.15 OrthoFinder output from all 47 species
AMTR_s00029p00134700 PSBQ-2, PSII-Q,... No description available 0.11 OrthoFinder output from all 47 species
AMTR_s00098p00154060 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.11 OrthoFinder output from all 47 species
AMTR_s00098p00157610 PSBQ-2, PSII-Q,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.18 OrthoFinder output from all 47 species
AT1G14150 PQL1, PQL2 PsbQ-like 2 0.06 OrthoFinder output from all 47 species
AT2G01918 PQL3 PsbQ-like 3 0.03 OrthoFinder output from all 47 species
AT3G01440 PQL1, PQL2 PsbQ-like 1 0.04 OrthoFinder output from all 47 species
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.13 OrthoFinder output from all 47 species
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.16 OrthoFinder output from all 47 species
Adi_g009979 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.17 OrthoFinder output from all 47 species
Adi_g043833 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.14 OrthoFinder output from all 47 species
Aev_g03692 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Aev_g43790 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Ala_g00903 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.15 OrthoFinder output from all 47 species
Als_g02853 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Als_g13839 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Aob_g17131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Aob_g42251 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.14 OrthoFinder output from all 47 species
Aspi01Gene30436.t1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Azfi_s0199.g057486 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Cba_g02399 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Cba_g63796 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Ceric.07G029100.1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.17 OrthoFinder output from all 47 species
Cre08.g372450 PSBQA, PSBQ-1, PSBQ Oxygen-evolving enhancer protein 3, chloroplastic... 0.09 OrthoFinder output from all 47 species
Dac_g01297 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.15 OrthoFinder output from all 47 species
Dcu_g03585 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Dcu_g41298 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Dde_g06282 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.16 OrthoFinder output from all 47 species
Ehy_g15147 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
GSVIVT01002809001 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.13 OrthoFinder output from all 47 species
GSVIVT01014586001 PQL1, PQL2 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.06 OrthoFinder output from all 47 species
GSVIVT01019955001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.12 OrthoFinder output from all 47 species
Gb_04734 PSBQ-2, PSII-Q, PSBQ component PsbQ of PS-II oxygen-evolving center 0.13 OrthoFinder output from all 47 species
LOC_Os02g36850.1 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.03 OrthoFinder output from all 47 species
LOC_Os04g44200.1 PQL3, LOC_Os04g44200 PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g01480.1 PQL1, PQL2,... component PnsL3/PQL2 of NDH lumen subcomplex L 0.04 OrthoFinder output from all 47 species
LOC_Os07g36080.1 PSBQA, PSBQ-1,... component PsbQ of PS-II oxygen-evolving center 0.12 OrthoFinder output from all 47 species
Lfl_g00670 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
MA_218996g0010 PSBQA, PSBQ-1, PSBQ component PsbQ of PS-II oxygen-evolving center 0.03 OrthoFinder output from all 47 species
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.16 OrthoFinder output from all 47 species
Msp_g48334 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.18 OrthoFinder output from all 47 species
Nbi_g27611 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g01040 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Ore_g21011 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Ore_g34253 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Pir_g00788 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Pnu_g12550 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Pp3c13_6570V3.1 PSBQA, PSBQ-1,... photosystem II subunit QA 0.07 OrthoFinder output from all 47 species
Ppi_g11659 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012902 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Sam_g14072 No alias component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Smo106248 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
Solyc02g079950.3.1 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.09 OrthoFinder output from all 47 species
Solyc05g007780.3.1 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.08 OrthoFinder output from all 47 species
Solyc10g006530.4.1 PQL1, PQL2,... Photosynthetic NDH subunit of lumenal location 3,... 0.06 OrthoFinder output from all 47 species
Spa_g21161 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Spa_g25498 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Spa_g56049 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.12 OrthoFinder output from all 47 species
Tin_g19213 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.19 OrthoFinder output from all 47 species
Zm00001e007556_P001 PQL3, Zm00001e007556 PsbQ-like protein 3, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e010513_P001 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.18 OrthoFinder output from all 47 species
Zm00001e014918_P002 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.13 OrthoFinder output from all 47 species
Zm00001e022814_P002 PQL1, PQL2,... component PnsL2/PQL1 of NDH lumen subcomplex L 0.02 OrthoFinder output from all 47 species
Zm00001e032657_P001 PQL1, PQL2,... component PnsL3/PQL2 of NDH lumen subcomplex L 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 97 284
No external refs found!