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  5. Len_g22396

Len_g22396 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22396

Target Alias Description ECC score Gene Family Method Actions
Aop_g08356 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42234.1 BAT1, LOC_Os01g42234 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g71700.1 BAT1, LOC_Os01g71700 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g71720.1 BAT1, LOC_Os01g71720 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
Len_g20177 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g08480 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_10435539g0010 BAT1 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Msp_g27472 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Smo88146 BAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Zm00001e018679_P001 BAT1, Zm00001e018679 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 41 496
No external refs found!