Len_g21745 (FTSH8)

Aliases : FTSH8

Description : component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes & original description: none

Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g21745
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00262430	ATFTSH6, FTSH6,...	ATP-dependent zinc metalloprotease FTSH 6, chloroplastic...	0.02	OrthoFinder output from all 47 species
AMTR_s00106p00108310	VAR2, FTSH2,...	Protein degradation.peptidase families.metallopeptidase...	0.05	OrthoFinder output from all 47 species
AT1G06430	FTSH8	FTSH protease 8	0.03	OrthoFinder output from all 47 species
AT2G30950	VAR2, FTSH2	FtsH extracellular protease family	0.03	OrthoFinder output from all 47 species
Adi_g087056	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Aev_g02360	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Ala_g14174	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Als_g07586	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Als_g20560	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Aob_g17362	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Aop_g14163	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.1	OrthoFinder output from all 47 species
Aspi01Gene12384.t1	FTSH8, Aspi01Gene12384	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Aspi01Gene18386.t1	FTSH8, Aspi01Gene18386	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Azfi_s0022.g016135	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Cba_g13333	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Cba_g75374	VAR2, FTSH2	EXECUTER-cleavage protease *(FtsH2) & original description: none	0.09	OrthoFinder output from all 47 species
Ceric.03G093200.1	FTSH8, Ceric.03G093200	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Ceric.22G054100.1	FTSH8, Ceric.22G054100	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.11	OrthoFinder output from all 47 species
Cre09.g393950	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	OrthoFinder output from all 47 species
Cre17.g720050	FTSH8	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Dac_g10534	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Dcu_g12670	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13134	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Dde_g07705	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g23743	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Ehy_g03938	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
GSVIVT01020760001	VAR2, FTSH2	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder output from all 47 species
GSVIVT01036484001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder output from all 47 species
Gb_12830	FTSH8	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.07	OrthoFinder output from all 47 species
LOC_Os06g45820.1	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.09	OrthoFinder output from all 47 species
Lfl_g04989	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.09	OrthoFinder output from all 47 species
Mp4g19200.1	VAR2, FTSH2	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.02	OrthoFinder output from all 47 species
Msp_g02086	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.1	OrthoFinder output from all 47 species
Msp_g07153	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g11426	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.13	OrthoFinder output from all 47 species
Ore_g26838	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Ore_g45571	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g09681	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.11	OrthoFinder output from all 47 species
Ppi_g17712	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Sam_g18762	No alias	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Sam_g37450	No alias	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Smo149856	VAR2, FTSH2	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
Solyc07g055320.4.1	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.11	OrthoFinder output from all 47 species
Spa_g25819	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Tin_g04117	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.11	OrthoFinder output from all 47 species
Zm00001e007868_P001	Zm00001e007868	component FtsHi of protein translocation ATPase motor complex	0.02	OrthoFinder output from all 47 species
Zm00001e030358_P003	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.04	OrthoFinder output from all 47 species
Zm00001e037753_P001	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004096	catalase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	493	682
IPR041569	AAA_lid_3	434	477
IPR003959	ATPase_AAA_core	279	410

External Links

No external refs found!

Len_g21745 (FTSH8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation