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  5. Len_g21531

Len_g21531 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21531

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene29153.t1 Aspi01Gene29153 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53747.t2 Aspi01Gene53747 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_21689 NTMC2TYPE4, NTMC2T4 Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g38992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58288 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17381 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010593 STI not classified & original description: CDS=440-3766 0.03 OrthoFinder output from all 47 species
Smo420117 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g17175 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 691 776
No external refs found!