Len_g21465

Description : not classified & original description: none

Gene families : OG0004726 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004726_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g21465
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00259870	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
Ala_g14985	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0373.g067177	No alias	not classified & original description: CDS=557-1150	0.03	OrthoFinder output from all 47 species
GSVIVT01019995001	No alias	No description available	0.03	OrthoFinder output from all 47 species
LOC_Os08g33900.1	LOC_Os08g33900	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Lfl_g08828	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g15690.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g28354	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071586	CAAX-box protein processing	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003675	Rce1-like	233	318

External Links

No external refs found!