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  5. Len_g20856

Len_g20856


Description : not classified & original description: none


Gene families : OG0000171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000171_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20856

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00225p00021580 evm_27.TU.AmTr_v1... Aldehyde oxidase GLOX1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene01002.t1 Aspi01Gene01002 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09273.t1 Aspi01Gene09273 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17024.t1 Aspi01Gene17024 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25764 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.03 OrthoFinder output from all 47 species
Gb_29499 No alias Aldehyde oxidase GLOX OS=Vitis pseudoreticulata... 0.03 OrthoFinder output from all 47 species
Len_g05026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015202 GO-like_E_set 456 555
IPR009880 Glyoxal_oxidase_N 61 301
No external refs found!