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  5. Len_g20663

Len_g20663


Description : not classified & original description: none


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20663

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g021099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.42 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre19.g751197 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g11589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g54110.1 LOC_Os02g54110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_242029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_55053g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g25050.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g36824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012003 No alias not classified & original description: CDS=123-3902 0.03 OrthoFinder output from all 47 species
Smo78845 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g042380.4.1 Solyc07g042380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016059_P003 Zm00001e016059 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 403 598
No external refs found!