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  5. Len_g20416

Len_g20416 (GAD, GAD1)


Aliases : GAD, GAD1

Description : glutamate decarboxylase *(GAD) & original description: none


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20416
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.04 OrthoFinder output from all 47 species
AT5G17330 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Adi_g040720 GAD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03790 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08081 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene37978.t1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G021000.1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G036400.1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01000391001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.08 OrthoFinder output from all 47 species
LOC_Os03g51080.1 GAD, GAD1, LOC_Os03g51080 glutamate decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os08g36320.1 GAD, GAD1, LOC_Os08g36320 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Lfl_g20287 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
MA_102154g0010 GAD, GAD1 Glutamate decarboxylase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_65512g0010 GAD3 Glutamate decarboxylase OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Mp3g23860.1 GAD, GAD1 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Nbi_g07461 GAD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09361 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06503 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08445 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17072 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007078 GAD2 glutamate decarboxylase *(GAD) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc03g098240.3.1 GAD, GAD1, Solyc03g098240 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Solyc04g025530.3.1 GAD4, Solyc04g025530 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc05g054050.4.1 GAD, GAD1, Solyc05g054050 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g05104 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12089 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39438 GAD2 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55008 GAD2 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 43 385
No external refs found!