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  5. Len_g20285

Len_g20285


Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20285

Target Alias Description ECC score Gene Family Method Actions
Aob_g07105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13137.t2 Aspi01Gene13137 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66626.t1 Aspi01Gene66626 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04716 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Ehy_g00515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g26110.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pir_g44629 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Pnu_g06358 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 124 158
No external refs found!