Aliases : U1-70K, U1SNRNP
Description : component *(U1-70K) of U1 snRNP complex & original description: none
Gene families : OG0003392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G50670 | U1-70K, U1SNRNP | U1 small nuclear ribonucleoprotein-70K | 0.03 | OrthoFinder output from all 47 species | |
Ala_g33535 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g10647 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G033200.1 | U1-70K, U1SNRNP,... | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001333.27 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g656250 | U1-70K, U1SNRNP | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g085420.4.1 | U1-70K, U1SNRNP,... | component U1-70K of U1 small nuclear ribonucleoprotein... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g21778 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g26650 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56473 | U1-70K, U1SNRNP | component *(U1-70K) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |