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  5. Len_g19404

Len_g19404


Description : not classified & original description: none


Gene families : OG0004925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19404

Target Alias Description ECC score Gene Family Method Actions
Adi_g054857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G033200.1 Ceric.12G033200 not classified & original description: pacid=50601369... 0.04 OrthoFinder output from all 47 species
Dac_g06680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g31150.1 LOC_Os02g31150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27283g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014651_P001 Zm00001e014651 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 266 313
No external refs found!