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  5. Len_g19173

Len_g19173


Description : component *(SKI3) of SUPERKILLER regulation complex & original description: none


Gene families : OG0004899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19173

Target Alias Description ECC score Gene Family Method Actions
AT1G76630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g27528 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.07 OrthoFinder output from all 47 species
Cre12.g493550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11179 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013460001 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder output from all 47 species
Lfl_g09869 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.04 OrthoFinder output from all 47 species
MA_8519142g0010 No alias Tetratricopeptide repeat protein SKI3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g07483 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004767 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.02 OrthoFinder output from all 47 species
Smo115934 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder output from all 47 species
Spa_g12824 No alias component *(SKI3) of SUPERKILLER regulation complex &... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!