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Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G46790 | CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G47530 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g03970 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17592 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25080 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38788 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g40241 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000793 | No alias | not classified & original description: CDS=1-2415 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036581 | No alias | not classified & original description: CDS=1-1653 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0175.g055972 | OTP86 | not classified & original description: CDS=1-2742 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20235 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77978 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G032600.1 | Ceric.09G032600 | not classified & original description: pacid=50587514... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G041000.1 | Ceric.11G041000 | not classified & original description: pacid=50594870... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G028100.1 | Ceric.13G028100 | not classified & original description: pacid=50635194... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G006200.1 | Ceric.26G006200 | not classified & original description: pacid=50598886... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G023200.1 | Ceric.30G023200 | not classified & original description: pacid=50609019... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43253 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08224 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g21230 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10113 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19040 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33726 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03400 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03890 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17772 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18528 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g26141 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06094 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07754 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19657 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429069g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_30949g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| MA_43727g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_465411g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| MA_742g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8678g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| MA_921g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| MA_9415113g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25303 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37890 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04531 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22129 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30640 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06373 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g58878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008668 | No alias | not classified & original description: CDS=1-2001 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g54818 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29126 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032242_P001 | Zm00001e032242 | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 524 | 548 |
| IPR002885 | Pentatricopeptide_repeat | 585 | 611 |
| IPR002885 | Pentatricopeptide_repeat | 420 | 442 |
| IPR002885 | Pentatricopeptide_repeat | 550 | 577 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 492 |
| IPR002885 | Pentatricopeptide_repeat | 343 | 390 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 139 | 186 |
| No external refs found! |