Len_g17930 (PBF1)

Aliases : PBF1

Description : beta-type-6 component *(PBF) of 26S proteasome & original description: none

Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g17930

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01027613001	PBF1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
LOC_Os08g41730.1	PBF1, LOC_Os08g41730	component beta type-6 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Mp1g12450.1	PBF1	component beta type-6 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Pp3c16_16960V3.1	PBF1, Pp3c16_16960	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	9	204

External Links

No external refs found!