Len_g16921 (ATTRB1, TRB1)

Aliases : ATTRB1, TRB1

Description : PRC2-recruiting factor (TRB) of PRC2 histone methylation complex & original description: none

Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g16921

Target	Alias	Description	ECC score	Gene Family Method
Adi_g028539	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20024	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.06	OrthoFinder output from all 47 species
Als_g21441	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Cba_g12893	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Cba_g62975	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g72176	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.02	OrthoFinder output from all 47 species
Ceric.14G095100.1	ATTRB1, TRB1,...	not classified & original description: pacid=50634919...	0.03	OrthoFinder output from all 47 species
Dde_g05238	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Pir_g08695	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Ppi_g10988	ATTRB1, TRB1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005172	ATTRB1, TRB1	not classified & original description: CDS=343-1284	0.02	OrthoFinder output from all 47 species
Sam_g27570	No alias	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.03	OrthoFinder output from all 47 species
Spa_g08685	ATTRB1, TRB1	PRC2-recruiting factor (TRB) of PRC2 histone methylation...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	5	56
IPR005818	Histone_H1/H5_H15	120	178

External Links

No external refs found!

Len_g16921 (ATTRB1, TRB1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation