Len_g16757


Description : miRNA uridylyltransferase *(HESO1) & original description: none


Gene families : OG0002070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16757

Target Alias Description ECC score Gene Family Method Actions
AT3G45750 No alias Nucleotidyltransferase family protein 0.02 OrthoFinder output from all 47 species
Als_g11397 No alias miRNA uridylyltransferase *(HESO1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G033400.1 Ceric.30G033400 not classified & original description: pacid=50607923... 0.03 OrthoFinder output from all 47 species
Cre01.g019700 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre14.g612150 No alias Protein HESO1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os08g44560.1 LOC_Os08g44560 Protein HESO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g01351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12587 No alias miRNA uridylyltransferase *(URT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32754 No alias miRNA uridylyltransferase *(HESO1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008600 No alias not classified & original description: CDS=340-1713 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017558 No alias miRNA uridylyltransferase *(URT1) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g091860.4.1 Solyc09g091860 Protein HESO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g12070 No alias miRNA uridylyltransferase *(URT1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!