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  5. Len_g16705

Len_g16705


Description : not classified & original description: none


Gene families : OG0000765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16705

Target Alias Description ECC score Gene Family Method Actions
Adi_g021586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026330 No alias not classified & original description: CDS=24-1157 0.03 OrthoFinder output from all 47 species
Cba_g11745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G087700.1 Ceric.02G087700 not classified & original description: pacid=50584452... 0.06 OrthoFinder output from all 47 species
Ceric.14G018200.1 Ceric.14G018200 not classified & original description: pacid=50634515... 0.06 OrthoFinder output from all 47 species
Ceric.31G033800.1 Ceric.31G033800 not classified & original description: pacid=50573729... 0.07 OrthoFinder output from all 47 species
Dac_g10926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g01977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000161 No alias not classified & original description: CDS=159-1424 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000665 No alias not classified & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010096 No alias not classified & original description: CDS=1-1284 0.03 OrthoFinder output from all 47 species
Sam_g09744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g04300 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g10066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53605 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g00873 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 100 385
No external refs found!