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  5. Len_g16283

Len_g16283


Description : RNA polymerase-IV-positioning factor *(SHH) & original description: none


Gene families : OG0001794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001794_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16283

Target Alias Description ECC score Gene Family Method Actions
Pir_g02986 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g04343 No alias RNA polymerase-IV-positioning factor *(SHH) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009676_P002 Zm00001e009676 RNA polymerase-IV-positioning factor (SHH).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 121 248
No external refs found!